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- (-) Remove Foundational: factual knowledge & comprehension filter Foundational: factual knowledge & comprehension
- (-) Remove One class period filter One class period
- (-) Remove Structure and Function filter Structure and Function
Make It Stick: Teaching Gene Targeting with Ribbons and FastenersLearning Objectives
- Students will be able to design targeting constructs.
- Students will be able to predict changes to the gene locus after homologous recombination.
- Students will be able to design experiments to answer a biological question (e.g., "Design an experiment to test if the expression of gene X is necessary for limb development").
Meiosis: A Play in Three Acts, Starring DNA SequenceLearning Objectives
- Students will be able to identify sister chromatids and homologous chromosomes at different stages of meiosis.
- Students will be able to identify haploid and diploid cells, whether or not the chromosomes are replicated.
- Students will be able to explain why homologous chromosomes must pair during meiosis.
- Students will be able to relate DNA sequence similarity to chromosomal structures.
- Students will be able to identify crossing over as the key to proper pairing of homologous chromosomes during meiosis.
- Students will be able to predict the outcomes of meiosis for a particular individual or cell.
A Close-Up Look at PCRLearning ObjectivesAt the end of this lesson students will be able to...
- Describe the role of a primer in PCR
- Predict sequence and length of PCR product based on primer sequences
- Recognize that primers are incorporated into the final PCR products and explain why
- Identify covalent and hydrogen bonds formed and broken during PCR
- Predict the structure of PCR products after each cycle of the reaction
- Explain why amplification proceeds exponentially
Exploration of the Human Genome by Investigation of Personalized SNPsLearning ObjectivesStudents successfully completing this lesson will be able to:
- Effectively use the bioinformatics databases (SNPedia, the UCSC Genome Browser, and NCBI) to explore SNPs of interest within the human genome.
- Identify three health-related SNPs of personal interest and use the UCSC Genome Browser to define their precise chromosomal locations and determine whether they lie within a gene or are intergenic.
- Establish a list of all genome-wide association studies correlated with a particular health-related SNP.
- Predict which model organism would be most appropriate for conducting further research on a human disease.
Plotting Cranial and Spinal Nerve Pathways in a Human Anatomy LabLearning Objectives
- Identify and describe the functions of cranial and spinal nerves
- Identify cranial and spinal nerve origination points and what structures they innervate
- Trace the routes that cranial and spinal nerves take throughout the body
Using the Cell Engineer/Detective Approach to Explore Cell Structure and FunctionLearning ObjectivesStudents will be able to:
- Identify the major cell organelles
- List the major functions of the organelles
- Predict how changes in organelle/cell structure could alter cellular function
- Explain how overall cellular function is dependent upon organelles/cell structure
- Relate cell structure to everyday contexts
An undergraduate bioinformatics curriculum that teaches eukaryotic gene structureLearning ObjectivesModule 1
- Demonstrate basic skills in using the UCSC Genome Browser to navigate to a genomic region and to control the display settings for different evidence tracks.
- Explain the relationships among DNA, pre-mRNA, mRNA, and protein.
- Describe how a primary transcript (pre-mRNA) can be synthesized using a DNA molecule as the template.
- Explain the importance of the 5' and 3' regions of the gene for initiation and termination of transcription by RNA polymerase II.
- Identify the beginning and the end of a transcript using the capabilities of the genome browser.
- Explain how the primary transcript generated by RNA polymerase II is processed to become a mature mRNA, using the sequence signals identified in Module 2.
- Use the genome browser to analyze the relationships among:
- 5' capping
- 3' polyadenylation
- Identify splice donor and acceptor sites that are best supported by RNA-Seq data and TopHat splice junction predictions.
- Utilize the canonical splice donor and splice acceptor sequences to identify intron-exon boundaries.
- Determine the codons for specific amino acids and identify reading frames by examining the Base Position track in the genome browser.
- Assemble exons to maintain the open reading frame (ORF) for a given gene.
- Define the phases of the splice donor and acceptor sites and describe how they impact the maintenance of the ORF.
- Identify the start and stop codons of an assembled ORF.
- Demonstrate how alternative splicing of a gene can lead to different mRNAs.
- Show how alternative splicing can lead to the production of different polypeptides and result in drastic changes in phenotype.
Homologous chromosomes? Exploring human sex chromosomes, sex determination and sex reversal using bioinformatics...Learning ObjectivesStudents successfully completing this lesson will:
- Practice navigating an online bioinformatics resource and identify evidence relevant to solving investigation questions
- Contrast the array of genes expected on homologous autosomal chromosomes pairs with the array of genes expected on sex chromosome pairs
- Use bioinformatics evidence to defend the definition of homologous chromosomes
- Define chromosomal sex and defend the definition using experimental data
- Investigate the genetic basis of human chromosomal sex determination
- Identify at least two genetic mutations can lead to sex reversal
Teaching Cell Structures through GamesLearning Objectives
- Students will identify cell structures when viewing an image or diagram of a cell.
- Students will define the function of eukaryotic organelles and structures, including describing the processes and conditions related to transmembrane transport
- Students will differentiate between prokaryotic and eukaryotic cells, plant and animal cells according to their structural organization.
Lights, Camera, Acting Transport! Using role-play to teach membrane transportLearning ObjectivesAt the end of this activity, students should be able to:
- Compare and contrast the mechanisms of simple diffusion, facilitated diffusion, and active transport (both primary and secondary).
- Identify, and provide a rationale for, the mechanism(s) by which various substances cross the plasma membrane.
- Describe the steps involved in the transport of ions by the Na+/K+ pump, and explain the importance of electrogenic pumps to the generation and maintenance of membrane potentials.
- Explain the function of electrochemical gradients as potential energy sources specifically used in secondary active transport.
- Relate each molecule or ion transported by the Na+/glucose cotransporter (SGLT1) to its own concentration or electrochemical gradient, and describe which molecules travel with and against these gradients.