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Air Quality Data Mining: Mining the US EPA AirData website for student-led evaluation of air quality issuesLearning ObjectivesStudents will be able to:
- Describe various parameters of air quality that can negatively impact human health, list priority air pollutants, and interpret the EPA Air Quality Index as it relates to human health.
- Identify an air quality problem that varies on spatial and/or temporal scales that can be addressed using publicly available U.S. EPA air data.
- Collect appropriate U.S. EPA Airdata information needed to answer that/those questions, using the U.S. EPA Airdata website data mining tools.
- Analyze the data as needed to address or answer their question(s).
- Interpret data and draw conclusions regarding air quality levels and/or impacts on human and public health.
- Communicate results in the form of a scientific paper.
CURE-all: Large Scale Implementation of Authentic DNA Barcoding Research into First-Year Biology CurriculumLearning ObjectivesStudents will be able to: Week 1-4: Fundamentals of Science and Biology
- List the major processes involved in scientific discovery
- List the different types of scientific studies and which types can establish causation
- Design experiments with appropriate controls
- Create and evaluate phylogenetic trees
- Define taxonomy and phylogeny and explain their relationship to each other
- Explain DNA sequence divergence and how it applies to evolutionary relationships and DNA barcoding
- Define and measure biodiversity and explain its importance
- Catalog organisms using the morphospecies concept
- Geographically map organisms using smartphones and an online mapping program
- Calculate metrics of species diversity using spreadsheet software
- Use spreadsheet software to quantify and graph biodiversity at forest edges vs. interiors
- Write a formal lab report
- Extract, amplify, visualize and sequence DNA using standard molecular techniques (PCR, gel electrophoresis, Sanger sequencing)
- Explain how DNA extraction, PCR, gel electrophoresis, and Sanger sequencing work at the molecular level
- Trim and assemble raw DNA sequence data
- Taxonomically identify DNA sequences isolated from unknown organisms using BLAST
- Visualize sequence data relationships using sequence alignments and gene-based phylogenetic trees
- Map and report data in a publicly available online database
- Share data in a formal scientific poster
Teaching Biodiversity with Museum Specimens in an Inquiry-Based LabLearning ObjectivesStudents completing this lab module will:
- Learn how to appropriately handle and measure museum specimens.
- Develop the necessary statistical skills to analyze museum specimen data.
- Become familiar with how to search an online museum database and integrate supplemental data with their own dataset.
- Strengthen scientific communication skills by presenting research to their peers.
- Demonstrate ability to investigate scientific questions and address obstacles that occur during data collection and integration.
- Increase proficiency in managing and using large datasets for scientific research.
- Make connections between natural history knowledge and morphology of organisms in developing and testing hypotheses.
Quantifying and Visualizing Campus Tree PhenologyLearning ObjectivesThe Learning Objectives of this lesson span across the entire semester.
- Observe and collect information on phenological changes in local trees.
- Become familiar with a database and how to work with large datasets.
- Analyze and visualize data from the database to test their hypotheses and questions.
- Develop a research proposal including empirically-driven questions and hypotheses.
- Synthesize the results of their analysis in the context of plant biodiversity and local environmental conditions.
Bad Cell Reception? Using a cell part activity to help students appreciate cell biology, with an improved data plan and...Learning Objectives
- Identify cell parts and explain their function
- Explain how defects in a cell part can result in human disease
- Generate thought-provoking questions that expand upon existing knowledge
- Create a hypothesis and plan an experiment to answer a cell part question
- Find and reference relevant cell biology journal articles