Protein - Information in Action [PROTEOMICS]
Where are data about the proteome found (e.g., amino acid sequence and structure) and how are they stored and accessed?
- Describe how protein sequence data are represented (e.g., FASTA, GenBank, etc.)
- Describe the different protein databases available at NCBI (sequence, structure, function).
- Describe how the NCBI databases intersect with other databases (e.g., EBI, DDBJ, UniProt, etc.).
- Compare and contrast data contained in different databases.
- Search for a protein record in a database with a given accession number.
- Create a collection of records that meet a specified criterion (e.g., gene name or symbol).
- Describe the types of metadata that accompany sequence, structure, and function data to make for useful biological interpretation (e.g. biological source, accession number, UniProt number, journal articles, etc.).